Functional clusters
Information
- Type MapMan
- Description Amino acid metabolism.degradation.aromatic amino acid.tyrosine
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Glycine max | Gm06 | 1 | CH_gma_206 | 4 | 20 | 0.000000793447 |
| Papaver somniferum | NC_039358.1 | 1 | CH_pso_505 | 3 | 11 | 0.000166774 |
| Glycine max | Gm06 | 2 | CH_gma_206 | 4 | 20 | 0.000000793447 |
| Papaver somniferum | NC_039358.1 | 2 | CH_pso_505 | 3 | 11 | 0.000166774 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| 4.2.8.4.1 | Amino acid metabolism.degradation.aromatic amino acid.tyrosine.tyrosine aminotransferase (TAT) | 113 |
| 4.2.8.4.2 | Amino acid metabolism.degradation.aromatic amino acid.tyrosine.homogentisate dioxygenase | 7 |
| 4.2.8.4.3 | Amino acid metabolism.degradation.aromatic amino acid.tyrosine.maleylacetoacetate isomerase | 63 |
| 4.2.8.4.4 | Amino acid metabolism.degradation.aromatic amino acid.tyrosine.fumarylacetoacetate hydrolase (FAH) | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |