Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.degradation.branched-chain amino acid.acyl-CoA dehydrogenase oxidation.electron transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_7 1 CH_amhyb_143 2 2 0.0000841751
Camellia sinensis var. sinensis Chr9 1 CH_camsi_124 4 5 0.0000000000506183
Coffea canephora chr3 1 CH_ccan_193 2 12 0.0000425888
Cucumis melo chr06 1 CH_cme_184 2 2 0.0000667111
Hydrangea macrophylla Hma1.2p1_0324F.1 1 CH_hma_239 2 2 0.000111086
Sequoiadendron giganteum chr10 1 CH_sgi_246 4 5 0.00000000000173422
Amaranthus hybridus AmaHy_arrow1_Scaffold_7 2 CH_amhyb_143 2 2 0.0000841751
Camellia sinensis var. sinensis Chr9 2 CH_camsi_124 4 5 0.0000000000506183
Coffea canephora chr3 2 CH_ccan_193 2 12 0.0000425888
Cucumis melo chr06 2 CH_cme_184 2 2 0.0000667111
Hydrangea macrophylla Hma1.2p1_0324F.1 2 CH_hma_239 2 2 0.000111086
Sequoiadendron giganteum chr10 2 CH_sgi_246 4 5 0.00000000000173422

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001