Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.degradation.branched-chain amino acid.acyl-CoA dehydrogenase oxidation.ETF electron transfer flavoprotein heterodimer.subunit alpha

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Carya illinoinensis Chr11 1 CH_cil_394 2 3 0.000185943
Cucumis sativus L. chr3 1 CH_csa_250 2 2 0.000250428
Physcomitrium patens Chr15 1 CH_ppa_197 2 4 0.000367613
Salix brachista GWHAAZH00000011 1 CH_sbr_325 2 4 0.00037806
Sequoiadendron giganteum chr4 1 CH_sgi_774 2 2 0.0000487151
Trochodendron aralioides group17 1 CH_tar_314 2 3 0.000180104
Utricularia gibba unitig_62 1 CH_ugi_132 2 2 0.0000734592
Carya illinoinensis Chr11 2 CH_cil_394 2 3 0.000185943
Cucumis sativus L. chr3 2 CH_csa_250 2 2 0.000250428
Physcomitrium patens Chr15 2 CH_ppa_197 2 4 0.000367613
Salix brachista GWHAAZH00000011 2 CH_sbr_325 2 4 0.00037806
Sequoiadendron giganteum chr4 2 CH_sgi_774 2 2 0.0000487151
Trochodendron aralioides group17 2 CH_tar_314 2 3 0.000180104
Utricularia gibba unitig_62 2 CH_ugi_132 2 2 0.0000734592

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001