Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.degradation.branched-chain amino acid

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Tarenaya hassleriana NW_010969548.1 1 CH_tha_201 3 6 0.000656388
Tarenaya hassleriana NW_010969548.1 2 CH_tha_201 3 6 0.000656388

Available child term results

Ontology identifier Description Number of clusters
4.2.7.2.1.1 Amino acid metabolism.degradation.branched-chain amino acid.branched-chain alpha-keto acid dehydrogenase complex.E1 2-oxoisovalerate dehydrogenase subcomplex.subunit alpha 18
4.2.7.2.3 Amino acid metabolism.degradation.branched-chain amino acid.branched-chain alpha-keto acid dehydrogenase complex.dihydrolipoamide dehydrogenase component E3 4
4.2.7.3 Amino acid metabolism.degradation.branched-chain amino acid.isovaleryl-CoA-dehydrogenase (IVDH) 10
4.2.7.4 Amino acid metabolism.degradation.branched-chain amino acid.3-hydroxyisobutyryl-CoA hydrolase (CHY) 37
4.2.7.5.1.1 Amino acid metabolism.degradation.branched-chain amino acid.leucine.methylcrotonoyl-CoA carboxylase heterodimer.subunit alpha 3
4.2.7.5.1.2 Amino acid metabolism.degradation.branched-chain amino acid.leucine.methylcrotonoyl-CoA carboxylase heterodimer.subunit beta 6
4.2.7.5.3 Amino acid metabolism.degradation.branched-chain amino acid.leucine.methylglutaconyl-CoA hydratase 8
4.2.7.6.1 Amino acid metabolism.degradation.branched-chain amino acid.valine.3-hydroxyisobutyrate dehydrogenase 4
4.2.7.6.2 Amino acid metabolism.degradation.branched-chain amino acid.valine.methylmalonate-semialdehyde dehydrogenase 53
4.2.7.8.1.1 Amino acid metabolism.degradation.branched-chain amino acid.acyl-CoA dehydrogenase oxidation.ETF electron transfer flavoprotein heterodimer.subunit alpha 14
4.2.7.8.1.2 Amino acid metabolism.degradation.branched-chain amino acid.acyl-CoA dehydrogenase oxidation.ETF electron transfer flavoprotein heterodimer.subunit beta 2
4.2.7.8.2 Amino acid metabolism.degradation.branched-chain amino acid.acyl-CoA dehydrogenase oxidation.electron transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) 12

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001