Functional clusters
Information
- Type MapMan
- Description Amino acid metabolism.degradation.threonine.threonine dehydratase
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Citrullus lanatus | CG_Chr04 | 1 | CH_cla_29 | 3 | 3 | 0.0000000118051 |
| Cucumis melo | chr08 | 1 | CH_cme_248 | 2 | 2 | 0.000200133 |
| Cucumis sativus L. | chr6 | 1 | CH_csa_47 | 4 | 5 | 0.00000000000872592 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 1 | CH_eca_105 | 3 | 3 | 0.0000000120814 |
| Sechium edule | LG10 | 1 | CH_sed_40 | 4 | 5 | 0.0000000000817003 |
| Citrullus lanatus | CG_Chr04 | 2 | CH_cla_29 | 3 | 3 | 0.0000000118051 |
| Cucumis melo | chr08 | 2 | CH_cme_248 | 2 | 2 | 0.000200133 |
| Cucumis sativus L. | chr6 | 2 | CH_csa_47 | 4 | 5 | 0.00000000000872592 |
| Erigeron canadensis | Conyza_canadensis_scaffold:9 | 2 | CH_eca_105 | 3 | 3 | 0.0000000120814 |
| Eucalyptus grandis | Chr01 | 2 | CH_egr_700 | 2 | 2 | 0.0000585274 |
| Sechium edule | LG10 | 2 | CH_sed_40 | 4 | 5 | 0.0000000000817003 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |