Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.degradation.lysine.D-2-hydroxyglutarate dehydrogenase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_3 1 CH_amhyb_156 2 2 0.0000841751
Coffea canephora chr7 1 CH_ccan_133 2 5 0.00000425891
Punica granatum NC_045132.1 1 CH_pgr_223 2 2 0.0000750356
Quercus lobata 10 1 CH_qlo_1057 2 3 0.000929264
Quercus lobata 6 1 CH_qlo_902 2 2 0.000309773
Amaranthus hybridus AmaHy_arrow1_Scaffold_3 2 CH_amhyb_156 2 2 0.0000841751
Coffea canephora chr7 2 CH_ccan_133 2 5 0.00000425891
Eucalyptus grandis Chr09 2 CH_egr_699 2 2 0.0000585274
Punica granatum NC_045132.1 2 CH_pgr_223 2 2 0.0000750356
Quercus lobata 10 2 CH_qlo_1057 2 3 0.000929264
Quercus lobata 6 2 CH_qlo_902 2 2 0.000309773

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001