Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.degradation.lysine.D-2-hydroxyglutarate synthase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_1 1 CH_aly_42 4 4 0.0000000000301961
Arabidopsis thaliana Chr1 1 CH_ath_332 2 3 0.000257837
Brassica carinata ChrC06 1 CH_bca_319 3 4 0.000000452353
Brassica napus C07 1 CH_bna_26 5 6 0.0000000000000106704
Brassica napus A07 1 CH_bna_325 3 6 0.00000375727
Brassica oleracea C7 1 CH_bol_62 4 11 0.00000000241901
Brassica rapa A07 1 CH_bra_95 3 4 0.000000221161
Cardamine hirsuta Chr1 1 CH_chi_311 2 2 0.000207361
Chenopodium quinoa C_Quinoa_Scaffold_4244 1 CH_cqu_476 2 3 0.000426422
Capsella rubella scaffold_1 1 CH_cru_337 2 2 0.000219346
Eutrema salsugineum scaffold_5 1 CH_esa_89 3 3 0.000000173971
Lonicera japonica GWHAAZE00000006 1 CH_lonja_522 2 4 0.000359303
Schrenkiella parvula ch1-1 1 CH_spa_78 3 3 0.0000000371957
Arabidopsis lyrata scaffold_1 2 CH_aly_42 4 4 0.0000000000301961
Arabidopsis thaliana Chr1 2 CH_ath_332 2 3 0.000257837
Brassica carinata ChrC06 2 CH_bca_319 3 4 0.000000452353
Brassica oleracea C7 2 CH_bol_62 4 11 0.00000000241901
Brassica rapa A07 2 CH_bra_95 3 4 0.000000221161
Cardamine hirsuta Chr1 2 CH_chi_311 2 2 0.000207361
Chenopodium quinoa C_Quinoa_Scaffold_4244 2 CH_cqu_476 2 3 0.000426422
Capsella rubella scaffold_1 2 CH_cru_337 2 2 0.000219346
Eutrema salsugineum scaffold_5 2 CH_esa_89 3 3 0.000000173971
Lonicera japonica GWHAAZE00000006 2 CH_lonja_522 2 4 0.000359303
Schrenkiella parvula ch1-1 2 CH_spa_78 3 3 0.0000000371957

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001