Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.degradation.proline.proline dehydrogenase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR03 1 CH_aox_178 2 2 0.0000801989
Capsicum annuum PGAv.1.6.scaffold497 1 CH_can_289 2 2 0.0000826105
Cicer arietinum L. Ca_LG6_v3 1 CH_car_299 2 3 0.000700425
Daucus carota DCARv2_Chr2 1 CH_dca_320 2 2 0.000191333
Medicago truncatula chr6 1 CH_mtr_237 3 3 0.0000000101287
Petunia axillaris Peaxi162Scf01056 1 CH_pax_216 2 2 0.0000703556
Papaver somniferum NC_039362.1 1 CH_pso_221 3 4 0.0000000608743
Papaver somniferum NC_039361.1 1 CH_pso_222 3 4 0.0000000608743
Sequoiadendron giganteum chr9 1 CH_sgi_561 3 10 0.000000427107
Solanum lycopersicum SL4.0ch02 1 CH_sly_349 2 2 0.0000586941
Solanum pennellii Spenn-ch02 1 CH_spe_298 2 2 0.000044479
Aquilegia oxysepala CHR03 2 CH_aox_178 2 2 0.0000801989
Capsicum annuum PGAv.1.6.scaffold497 2 CH_can_289 2 2 0.0000826105
Cicer arietinum L. Ca_LG6_v3 2 CH_car_299 2 3 0.000700425
Daucus carota DCARv2_Chr2 2 CH_dca_320 2 2 0.000191333
Petunia axillaris Peaxi162Scf01056 2 CH_pax_216 2 2 0.0000703556
Papaver somniferum NC_039362.1 2 CH_pso_221 3 4 0.0000000608743
Papaver somniferum NC_039361.1 2 CH_pso_222 3 4 0.0000000608743
Sequoiadendron giganteum chr9 2 CH_sgi_561 3 10 0.000000427107
Solanum lycopersicum SL4.0ch02 2 CH_sly_349 2 2 0.0000586941
Solanum pennellii Spenn-ch02 2 CH_spe_298 2 2 0.000044479

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001