Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.degradation.arginine.urease accessory protein activities.urease accessory protein (ureD)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00094 1 CH_atr_186 2 2 0.0000794407
Coffea canephora chr9 1 CH_ccan_215 3 60 0.0000742483
Coffea canephora chr9 1 CH_ccan_71 4 74 0.000000026755
Chenopodium quinoa C_Quinoa_Scaffold_3626 1 CH_cqu_367 2 2 0.000142146
Phaseolus vulgaris Chr07 1 CH_pvu_284 2 2 0.0000734727
Selenicereus undatus Scaffold_33677 1 CH_sun_124 2 2 0.0000726639
Vigna mungo CM024071.1 1 CH_vmu_205 2 2 0.0000646141
Vanilla planifolia CM028154.1 1 CH_vpl_176 2 2 0.000073888
Amborella trichopoda AmTr_v1.0_scaffold00094 2 CH_atr_186 2 2 0.0000794407
Coffea canephora chr9 2 CH_ccan_215 3 60 0.0000742483
Coffea canephora chr9 2 CH_ccan_71 4 74 0.000000026755
Chenopodium quinoa C_Quinoa_Scaffold_3626 2 CH_cqu_367 2 2 0.000142146
Phaseolus vulgaris Chr07 2 CH_pvu_284 2 2 0.0000734727
Selenicereus undatus Scaffold_33677 2 CH_sun_124 2 2 0.0000726639
Vigna mungo CM024071.1 2 CH_vmu_205 2 2 0.0000646141
Vanilla planifolia CM028154.1 2 CH_vpl_176 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001