Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.shikimate family.tryptophan.indole-3-glycerol phosphate synthase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Carica papaya supercontig_136 1 CH_cpa_218 2 2 0.0000950661
Olea europaea chr12 1 CH_oeu_305 2 2 0.000320273
Olea europaea chr1 1 CH_oeu_306 2 2 0.000320273
Petunia axillaris Peaxi162Scf00089 1 CH_pax_251 2 2 0.000211067
Sequoiadendron giganteum chr7 1 CH_sgi_483 3 3 0.0000000355983
Theobroma cacao Chromosome_1 1 CH_tca_175 3 5 0.000000321804
Carica papaya supercontig_136 2 CH_cpa_218 2 2 0.0000950661
Olea europaea chr12 2 CH_oeu_305 2 2 0.000320273
Olea europaea chr1 2 CH_oeu_306 2 2 0.000320273
Petunia axillaris Peaxi162Scf00089 2 CH_pax_251 2 2 0.000211067
Sequoiadendron giganteum chr7 2 CH_sgi_483 3 3 0.0000000355983
Theobroma cacao Chromosome_1 2 CH_tca_175 3 5 0.000000321804

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001