Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.shikimate family.tryptophan.anthranilate synthase heterodimer.subunit alpha

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_362 1 CH_aag_16 5 25 0.0000000000990779
Amaranthus hybridus AmaHy_arrow1_Scaffold_8 1 CH_amhyb_184 2 3 0.000252515
Beta vulgaris Chr7_EL10_PGA_scaffold5 1 CH_bvu_255 2 4 0.000496709
Chenopodium quinoa C_Quinoa_Scaffold_2465 1 CH_cqu_588 2 3 0.000852831
Daucus carota DCARv2_Chr5 1 CH_dca_397 2 3 0.000573967
Glycine max Gm18 1 CH_gma_135 3 3 0.0000000216099
Malus domestica Chr11 1 CH_mdo_305 3 8 0.00000422624
Olea europaea chr1 1 CH_oeu_366 2 2 0.000533789
Phaseolus vulgaris Chr01 1 CH_pvu_342 2 2 0.000220418
Anthoceros agrestis Sc2ySwM_362 2 CH_aag_16 5 25 0.0000000000990779
Amaranthus hybridus AmaHy_arrow1_Scaffold_8 2 CH_amhyb_184 2 3 0.000252515
Beta vulgaris Chr7_EL10_PGA_scaffold5 2 CH_bvu_255 2 4 0.000496709
Chenopodium quinoa C_Quinoa_Scaffold_2465 2 CH_cqu_588 2 3 0.000852831
Daucus carota DCARv2_Chr5 2 CH_dca_397 2 3 0.000573967
Glycine max Gm18 2 CH_gma_135 3 3 0.0000000216099
Malus domestica Chr11 2 CH_mdo_305 3 8 0.00000422624
Olea europaea chr1 2 CH_oeu_366 2 2 0.000533789
Phaseolus vulgaris Chr01 2 CH_pvu_342 2 2 0.000220418

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001