Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.5-enolpyruvyl-shikimate 3-phosphate (EPSP) synthase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Erigeron canadensis Conyza_canadensis_scaffold:4 1 CH_eca_355 2 2 0.000134617
Gossypium raimondii Chr08 1 CH_gra_392 2 3 0.000482475
Quercus lobata 8 1 CH_qlo_670 2 2 0.0000516289
Vitis vinifera chr15 1 CH_vvi_317 2 3 0.00022818
Erigeron canadensis Conyza_canadensis_scaffold:4 2 CH_eca_355 2 2 0.000134617
Gossypium hirsutum D12 2 CH_ghi_624 2 2 0.000267016
Gossypium raimondii Chr08 2 CH_gra_392 2 3 0.000482475
Quercus lobata 8 2 CH_qlo_670 2 2 0.0000516289
Vitis vinifera chr15 2 CH_vvi_317 2 3 0.00022818

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001