Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.serine family.cysteine.serine O-acetyltransferase (SAT)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Beta vulgaris Chr4_EL10_PGA_scaffold1 1 CH_bvu_229 2 2 0.000248375
Carpinus fangiana Cfa08 1 CH_cfa_350 2 2 0.000454408
Corchorus olitorius AWUE01016436.1 1 CH_col_76 2 2 0.000292099
Magnolia biondii Chr19 1 CH_mbi_217 3 7 0.00000123803
Magnolia biondii Chr08 1 CH_mbi_605 2 2 0.000485661
Prunus persica Pp04 1 CH_ppe_459 2 2 0.000447577
Pisum sativum chr2LG1 1 CH_psa_113 3 3 0.000000142858
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_371 2 2 0.000557543
Beta vulgaris Chr4_EL10_PGA_scaffold1 2 CH_bvu_229 2 2 0.000248375
Carpinus fangiana Cfa08 2 CH_cfa_350 2 2 0.000454408
Corchorus olitorius AWUE01016436.1 2 CH_col_76 2 2 0.000292099
Magnolia biondii Chr19 2 CH_mbi_217 3 7 0.00000123803
Magnolia biondii Chr08 2 CH_mbi_605 2 2 0.000485661
Prunus persica Pp04 2 CH_ppe_459 2 2 0.000447577
Pisum sativum chr2LG1 2 CH_psa_113 3 3 0.000000142858
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_371 2 2 0.000557543

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001