Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.serine family.non-photorespiratory serine.phosphoglycerate dehydrogenase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC07 1 CH_bca_929 2 2 0.000448905
Capsella rubella scaffold_3 1 CH_cru_166 3 4 0.000000641451
Davidia involucrata GWHABJS00000002 1 CH_din_498 2 2 0.000750188
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_329 2 2 0.000278772
Brassica carinata ChrC07 2 CH_bca_929 2 2 0.000448905
Capsella rubella scaffold_3 2 CH_cru_166 3 4 0.000000641451
Davidia involucrata GWHABJS00000002 2 CH_din_498 2 2 0.000750188
Eucalyptus grandis Chr07 2 CH_egr_711 3 8 0.0000632326
Eucalyptus grandis Chr07 2 CH_egr_741 3 10 0.000135437
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_329 2 2 0.000278772

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001