Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.isoleucine.ketol-acid reductoisomerase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr3 1 CH_camsi_221 5 55 0.0000000144642
Lonicera japonica GWHAAZE00000001 1 CH_lonja_286 3 12 0.00000473209
Papaver somniferum NC_039365.1 1 CH_pso_473 2 2 0.00013514
Papaver somniferum NC_039364.1 1 CH_pso_607 2 3 0.000405408
Simmondsia chinensis GWHAASQ00000012 1 CH_sci_145 2 2 0.0000851426
Theobroma cacao Chromosome_1 1 CH_tca_337 2 2 0.000219716
Tripterygium wilfordii NC_052248.1 1 CH_twi_208 2 2 0.000167252
Camellia sinensis var. sinensis Chr3 2 CH_camsi_221 5 55 0.0000000144642
Lonicera japonica GWHAAZE00000001 2 CH_lonja_286 3 12 0.00000473209
Papaver somniferum NC_039365.1 2 CH_pso_473 2 2 0.00013514
Papaver somniferum NC_039364.1 2 CH_pso_607 2 3 0.000405408
Simmondsia chinensis GWHAASQ00000012 2 CH_sci_145 2 2 0.0000851426
Theobroma cacao Chromosome_1 2 CH_tca_337 2 2 0.000219716
Tripterygium wilfordii NC_052248.1 2 CH_twi_208 2 2 0.000167252

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001