Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.isoleucine.acetolactate synthase complex.catalytic subunit

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC09 1 CH_bca_772 2 2 0.000213764
Corylus avellana 4 1 CH_cav_226 2 2 0.0000766695
Chara braunii BFEA01000136 1 CH_cbr_27 4 29 0.000000132371
Durio zibethinus NW_019167904.1 1 CH_dzi_274 2 2 0.000278093
Eutrema salsugineum scaffold_16 1 CH_esa_155 2 2 0.0000761499
Gossypium raimondii Chr05 1 CH_gra_287 2 2 0.000160832
Nelumbo nucifera chr5 1 CH_nnu_76 3 3 0.0000000114068
Quercus lobata 10 1 CH_qlo_635 2 2 0.0000516289
Rosa chinensis RcHm_v2.0_Chr7 1 CH_rch_461 2 2 0.0000398653
Brassica carinata ChrC09 2 CH_bca_772 2 2 0.000213764
Corylus avellana 4 2 CH_cav_226 2 2 0.0000766695
Chara braunii BFEA01000136 2 CH_cbr_27 4 29 0.000000132371
Durio zibethinus NW_019167904.1 2 CH_dzi_274 2 2 0.000278093
Eucalyptus grandis Chr02 2 CH_egr_870 2 3 0.000526721
Eutrema salsugineum scaffold_16 2 CH_esa_155 2 2 0.0000761499
Gossypium hirsutum A02 2 CH_ghi_662 2 2 0.000400523
Gossypium hirsutum D02 2 CH_ghi_663 2 2 0.000400523
Gossypium raimondii Chr05 2 CH_gra_287 2 2 0.000160832
Nelumbo nucifera chr5 2 CH_nnu_76 3 3 0.0000000114068
Quercus lobata 10 2 CH_qlo_635 2 2 0.0000516289
Rosa chinensis RcHm_v2.0_Chr7 2 CH_rch_461 2 2 0.0000398653

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001