Functional clusters
Information
- Type MapMan
- Description Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway.methylthioribose-1-phosphate isomerase (MTI)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Chenopodium quinoa | C_Quinoa_Scaffold_4329 | 1 | CH_cqu_119 | 3 | 3 | 0.0000000134707 |
| Daucus carota | DCARv2_Chr7 | 1 | CH_dca_99 | 3 | 5 | 0.0000000610117 |
| Hydrangea macrophylla | Hma1.2p1_0071F.1 | 1 | CH_hma_48 | 3 | 3 | 0.0000000740453 |
| Vanilla planifolia | CM028159.1 | 1 | CH_vpl_109 | 3 | 21 | 0.0000108847 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4329 | 2 | CH_cqu_119 | 3 | 3 | 0.0000000134707 |
| Daucus carota | DCARv2_Chr7 | 2 | CH_dca_99 | 3 | 5 | 0.0000000610117 |
| Hydrangea macrophylla | Hma1.2p1_0071F.1 | 2 | CH_hma_48 | 3 | 3 | 0.0000000740453 |
| Vanilla planifolia | CM028159.1 | 2 | CH_vpl_109 | 3 | 21 | 0.0000108847 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |