Functional clusters
Information
- Type MapMan
- Description Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Camellia sinensis var. sinensis | Chr3 | 1 | CH_camsi_284 | 4 | 14 | 0.000000143089 |
| Camellia sinensis var. sinensis | Chr3 | 2 | CH_camsi_284 | 4 | 14 | 0.000000143089 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| 4.1.2.2.6.4.1 | Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway.methylthioadenosine nucleosidase (MTN) | 23 |
| 4.1.2.2.6.4.2 | Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway.methylthioribose kinase (MTK) | 47 |
| 4.1.2.2.6.4.3 | Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway.methylthioribose-1-phosphate isomerase (MTI) | 8 |
| 4.1.2.2.6.4.4 | Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway.trifunctional methylthioribulose-1-phosphate dehydratase/enolase/phosphatase (DEP) | 20 |
| 4.1.2.2.6.4.5 | Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway.acireductone dioxygenase (ARD) | 86 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |