Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.transsulfuration pathway.cystathionine gamma-synthase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_362 1 CH_aag_89 2 2 0.0000802568
Actinidia chinensis Lachesis_group3 1 CH_ach_82 2 2 0.0000543213
Camellia sinensis var. sinensis Chr6 1 CH_camsi_306 3 5 0.00000031537
Eutrema salsugineum scaffold_2 1 CH_esa_232 2 2 0.00022845
Gossypium raimondii Chr01 1 CH_gra_452 2 4 0.000964906
Oryza sativa ssp. japonica chr10 1 CH_osa_79 3 3 0.0000000167352
Zea mays 1 1 CH_zma_215 2 2 0.000306788
Anthoceros agrestis Sc2ySwM_362 2 CH_aag_89 2 2 0.0000802568
Actinidia chinensis Lachesis_group3 2 CH_ach_82 2 2 0.0000543213
Camellia sinensis var. sinensis Chr6 2 CH_camsi_306 3 5 0.00000031537
Eutrema salsugineum scaffold_2 2 CH_esa_232 2 2 0.00022845
Gossypium raimondii Chr01 2 CH_gra_452 2 4 0.000964906
Oryza sativa ssp. japonica chr10 2 CH_osa_79 3 3 0.0000000167352
Zea mays 1 2 CH_zma_215 2 2 0.000306788

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001