Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.bifunctional homoserine dehydrogenase and aspartate kinase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr13 1 CH_acertr_421 2 2 0.000211491
Brassica carinata ChrC09 1 CH_bca_1059 2 3 0.000641272
Brassica oleracea C1 1 CH_bol_394 2 4 0.000588319
Camellia sinensis var. sinensis Chr4 1 CH_camsi_775 2 3 0.000412677
Magnolia biondii Chr04 1 CH_mbi_459 2 2 0.000145698
Marchantia polymorpha scaffold_16 1 CH_mpo_78 2 2 0.000110442
Sequoiadendron giganteum chr2 1 CH_sgi_867 2 2 0.0000487151
Sapria himalayana scaffold4_21100006 1 CH_shi_159 2 4 0.000171536
Tarenaya hassleriana NW_010965372.1 1 CH_tha_143 2 2 0.000209541
Vigna mungo CM024069.1 1 CH_vmu_288 2 2 0.000193842
Vanilla planifolia CM028160.1 1 CH_vpl_175 2 2 0.000073888
Acer truncatum chr13 2 CH_acertr_421 2 2 0.000211491
Brassica carinata ChrC09 2 CH_bca_1059 2 3 0.000641272
Brassica oleracea C1 2 CH_bol_394 2 4 0.000588319
Camellia sinensis var. sinensis Chr4 2 CH_camsi_775 2 3 0.000412677
Magnolia biondii Chr04 2 CH_mbi_459 2 2 0.000145698
Marchantia polymorpha scaffold_16 2 CH_mpo_78 2 2 0.000110442
Sequoiadendron giganteum chr2 2 CH_sgi_867 2 2 0.0000487151
Sapria himalayana scaffold4_21100006 2 CH_shi_159 2 4 0.000171536
Tarenaya hassleriana NW_010965372.1 2 CH_tha_143 2 2 0.000209541
Vigna mungo CM024069.1 2 CH_vmu_288 2 2 0.000193842
Vanilla planifolia CM028160.1 2 CH_vpl_175 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001