Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.hydroxy-tetrahydrodihydrodipicolinate synthase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr4 1 CH_acertr_407 2 2 0.000211491
Actinidia chinensis Lachesis_group23 1 CH_ach_122 2 2 0.000162964
Brassica carinata ChrC07 1 CH_bca_222 3 3 0.0000000575765
Camellia sinensis var. sinensis Chr3 1 CH_camsi_527 2 2 0.0000458547
Cicer arietinum L. Ca_LG7_v3 1 CH_car_263 2 2 0.000466981
Lotus japonicus chr3 1 CH_lja_11 6 6 2.94579e-19
Micromonas commoda Chr_01 1 CH_mco_10 2 2 0.000197961
Medicago truncatula chr8 1 CH_mtr_136 4 5 0.0000000000156055
Pisum sativum chr4LG4 1 CH_psa_82 3 3 0.0000000163266
Trifolium pratense Tp57577_TGAC_v2_LG6 1 CH_tpr_299 2 2 0.000227092
Acer truncatum chr4 2 CH_acertr_407 2 2 0.000211491
Actinidia chinensis Lachesis_group23 2 CH_ach_122 2 2 0.000162964
Brassica carinata ChrC07 2 CH_bca_222 3 3 0.0000000575765
Camellia sinensis var. sinensis Chr3 2 CH_camsi_527 2 2 0.0000458547
Cicer arietinum L. Ca_LG7_v3 2 CH_car_263 2 2 0.000466981
Eucalyptus grandis Chr05 2 CH_egr_382 3 3 0.0000000205534
Lotus japonicus chr3 2 CH_lja_11 6 6 2.94579e-19
Micromonas commoda Chr_01 2 CH_mco_10 2 2 0.000197961
Pisum sativum chr4LG4 2 CH_psa_82 3 3 0.0000000163266
Trifolium pratense Tp57577_TGAC_v2_LG6 2 CH_tpr_299 2 2 0.000227092

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001