Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.proline.main pathway.pyrroline-5-carboxylate reductase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Fragaria vesca Fvb7 1 CH_fve_330 2 2 0.00017673
Malus domestica Chr12 1 CH_mdo_357 3 25 0.0000198305
Prunus persica Pp07 1 CH_ppe_313 2 2 0.0000745962
Rosa chinensis RcHm_v2.0_Chr2 1 CH_rch_561 2 2 0.000119596
Simmondsia chinensis GWHAASQ00000013 1 CH_sci_194 2 3 0.000255417
Sequoiadendron giganteum chr4 1 CH_sgi_720 2 2 0.0000487151
Trochodendron aralioides group7 1 CH_tar_239 2 2 0.0000600366
Fragaria vesca Fvb7 2 CH_fve_330 2 2 0.00017673
Malus domestica Chr12 2 CH_mdo_357 3 25 0.0000198305
Prunus persica Pp07 2 CH_ppe_313 2 2 0.0000745962
Rosa chinensis RcHm_v2.0_Chr2 2 CH_rch_561 2 2 0.000119596
Simmondsia chinensis GWHAASQ00000013 2 CH_sci_194 2 3 0.000255417
Sequoiadendron giganteum chr4 2 CH_sgi_720 2 2 0.0000487151
Trochodendron aralioides group7 2 CH_tar_239 2 2 0.0000600366

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001