Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.ornithine.N2-acetylornithine deacetylase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Citrullus lanatus CG_Chr09 1 CH_cla_27 3 3 0.0000000118051
Cucumis melo chr04 1 CH_cme_75 3 4 0.0000000267023
Cucumis sativus L. chr3 1 CH_csa_196 2 2 0.0000834759
Malus domestica Chr06 1 CH_mdo_442 2 2 0.000113763
Pisum sativum chr2LG1 1 CH_psa_208 2 2 0.0000521635
Solanum lycopersicum SL4.0ch08 1 CH_sly_124 3 3 0.00000000516764
Solanum pennellii Spenn-ch08 1 CH_spe_99 3 3 0.00000000296764
Citrullus lanatus CG_Chr09 2 CH_cla_27 3 3 0.0000000118051
Cucumis melo chr04 2 CH_cme_75 3 4 0.0000000267023
Cucumis sativus L. chr3 2 CH_csa_196 2 2 0.0000834759
Malus domestica Chr06 2 CH_mdo_442 2 2 0.000113763
Pisum sativum chr2LG1 2 CH_psa_208 2 2 0.0000521635
Solanum lycopersicum SL4.0ch08 2 CH_sly_124 3 3 0.00000000516764
Solanum pennellii Spenn-ch08 2 CH_spe_99 3 3 0.00000000296764

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001