Functional clusters

Information

  • Type MapMan
  • Description Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.ornithine.N-acetylglutamate synthase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata Contig723 1 CH_bca_46 4 8 0.00000000000205126
Carya illinoinensis Chr01 1 CH_cil_392 2 3 0.000185943
Fragaria vesca Fvb7 1 CH_fve_331 2 2 0.00017673
Lupinus albus Lalb_Chr16 1 CH_lal_297 2 2 0.000314895
Salix brachista GWHAAZH00000014 1 CH_sbr_354 3 49 0.000437845
Sequoiadendron giganteum chr5 1 CH_sgi_1012 2 3 0.000146142
Brassica carinata Contig723 2 CH_bca_46 4 8 0.00000000000205126
Carya illinoinensis Chr01 2 CH_cil_392 2 3 0.000185943
Fragaria vesca Fvb7 2 CH_fve_331 2 2 0.00017673
Lupinus albus Lalb_Chr16 2 CH_lal_297 2 2 0.000314895
Salix brachista GWHAAZH00000014 2 CH_sbr_354 3 49 0.000437845
Sequoiadendron giganteum chr5 2 CH_sgi_1012 2 3 0.000146142

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001