Functional clusters

Information

  • Type MapMan
  • Description Carbohydrate metabolism.sorbitol metabolism.aldose 6-phosphate reductase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr5 1 CH_acertr_65 4 13 0.000000000751359
Arabidopsis lyrata scaffold_4 1 CH_aly_250 2 2 0.0000660044
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 1 CH_arhy_597 2 2 0.000299383
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 1 CH_arhy_598 2 2 0.000299383
Arabidopsis thaliana Chr2 1 CH_ath_235 2 2 0.0000286492
Cannabis sativa NC_044377.1 1 CH_cansat_249 2 2 0.0000656642
Cardamine hirsuta Chr4 1 CH_chi_265 2 2 0.0000691204
Citrullus lanatus CG_Chr02 1 CH_cla_179 2 2 0.000266134
Cucumis melo chr01 1 CH_cme_252 2 2 0.000200133
Chenopodium quinoa C_Quinoa_Scaffold_1257 1 CH_cqu_144 3 3 0.0000000673536
Chenopodium quinoa C_Quinoa_Scaffold_3670 1 CH_cqu_145 3 3 0.0000000673536
Cucumis sativus L. chr7 1 CH_csa_100 3 3 0.0000000418111
Daucus carota DCARv2_Chr6 1 CH_dca_275 2 3 0.000191327
Malus domestica Chr02 1 CH_mdo_300 3 9 0.00000362253
Quercus lobata 11 1 CH_qlo_695 2 2 0.0000516289
Tarenaya hassleriana NW_010963495.1 1 CH_tha_113 2 2 0.000069847
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_282 2 2 0.0000929238
Acer truncatum chr5 2 CH_acertr_65 4 13 0.000000000751359
Arabidopsis lyrata scaffold_4 2 CH_aly_250 2 2 0.0000660044
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.13 2 CH_arhy_597 2 2 0.000299383
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 2 CH_arhy_598 2 2 0.000299383
Arabidopsis thaliana Chr2 2 CH_ath_235 2 2 0.0000286492
Cannabis sativa NC_044377.1 2 CH_cansat_249 2 2 0.0000656642
Cardamine hirsuta Chr4 2 CH_chi_265 2 2 0.0000691204
Citrullus lanatus CG_Chr02 2 CH_cla_179 2 2 0.000266134
Cucumis melo chr01 2 CH_cme_252 2 2 0.000200133
Chenopodium quinoa C_Quinoa_Scaffold_1257 2 CH_cqu_144 3 3 0.0000000673536
Chenopodium quinoa C_Quinoa_Scaffold_3670 2 CH_cqu_145 3 3 0.0000000673536
Cucumis sativus L. chr7 2 CH_csa_100 3 3 0.0000000418111
Daucus carota DCARv2_Chr6 2 CH_dca_275 2 3 0.000191327
Eucalyptus grandis Chr09 2 CH_egr_797 2 2 0.000175582
Malus domestica Chr02 2 CH_mdo_300 3 9 0.00000362253
Quercus lobata 11 2 CH_qlo_695 2 2 0.0000516289
Tarenaya hassleriana NW_010963495.1 2 CH_tha_113 2 2 0.000069847
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_282 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001