Functional clusters

Information

  • Type MapMan
  • Description Carbohydrate metabolism.oligosaccharide metabolism.stachyose synthase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 1 CH_arhy_524 2 2 0.00017963
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.06 1 CH_arhy_525 2 2 0.00017963
Amborella trichopoda AmTr_v1.0_scaffold00003 1 CH_atr_214 2 2 0.0000794407
Beta vulgaris Scaffold_0005 1 CH_bvu_199 2 2 0.0000827917
Cardamine hirsuta Chr8 1 CH_chi_264 2 2 0.0000691204
Simmondsia chinensis GWHAASQ00000017 1 CH_sci_274 2 2 0.000510856
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.16 2 CH_arhy_524 2 2 0.00017963
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.06 2 CH_arhy_525 2 2 0.00017963
Amborella trichopoda AmTr_v1.0_scaffold00003 2 CH_atr_214 2 2 0.0000794407
Beta vulgaris Scaffold_0005 2 CH_bvu_199 2 2 0.0000827917
Cardamine hirsuta Chr8 2 CH_chi_264 2 2 0.0000691204
Simmondsia chinensis GWHAASQ00000017 2 CH_sci_274 2 2 0.000510856

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001