Functional clusters

Information

  • Type MapMan
  • Description Carbohydrate metabolism.trehalose metabolism.trehalase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_4119_HRSCAF_4138 1 CH_ama_62 2 2 0.0000862218
Aquilegia oxysepala CHR05 1 CH_aox_210 2 3 0.000240587
Camellia sinensis var. sinensis Chr14 1 CH_camsi_186 4 23 0.00000000256036
Cannabis sativa NC_044374.1 1 CH_cansat_248 2 2 0.0000656642
Capsicum annuum PGAv.1.6.scaffold567 1 CH_can_295 2 2 0.0000826105
Carya illinoinensis Chr11 1 CH_cil_445 2 2 0.000185948
Citrullus lanatus CG_Chr01 1 CH_cla_142 2 2 0.0000887115
Davidia involucrata GWHABJS00000019 1 CH_din_435 2 2 0.000300075
Lupinus albus Lalb_Chr05 1 CH_lal_216 2 2 0.0000524824
Olea europaea scaffold138 1 CH_oeu_190 2 2 0.0000533789
Punica granatum NC_045127.1 1 CH_pgr_136 3 5 0.000000844425
Punica granatum NC_045130.1 1 CH_pgr_374 2 2 0.000750356
Physcomitrium patens Chr24 1 CH_ppa_311 2 2 0.000612726
Populus trichocarpa Chr03 1 CH_ptr_456 2 2 0.000346801
Quercus lobata CM012294 1 CH_qlo_694 2 2 0.0000516289
Salix brachista GWHAAZH00000003 1 CH_sbr_305 2 2 0.000189042
Sequoiadendron giganteum chr8 1 CH_sgi_459 3 3 0.0000000142393
Selaginella moellendorffii scaffold_38 1 CH_smo_153 2 2 0.000560224
Theobroma cacao Chromosome_3 1 CH_tca_74 4 8 0.0000000000824943
Tripterygium wilfordii NC_052246.1 1 CH_twi_186 2 2 0.0000557507
Avicennia marina ScioBoG_4119_HRSCAF_4138 2 CH_ama_62 2 2 0.0000862218
Aquilegia oxysepala CHR05 2 CH_aox_210 2 3 0.000240587
Camellia sinensis var. sinensis Chr14 2 CH_camsi_186 4 23 0.00000000256036
Cannabis sativa NC_044374.1 2 CH_cansat_248 2 2 0.0000656642
Capsicum annuum PGAv.1.6.scaffold567 2 CH_can_295 2 2 0.0000826105
Carya illinoinensis Chr11 2 CH_cil_445 2 2 0.000185948
Citrullus lanatus CG_Chr01 2 CH_cla_142 2 2 0.0000887115
Davidia involucrata GWHABJS00000019 2 CH_din_435 2 2 0.000300075
Lupinus albus Lalb_Chr05 2 CH_lal_216 2 2 0.0000524824
Olea europaea scaffold138 2 CH_oeu_190 2 2 0.0000533789
Punica granatum NC_045127.1 2 CH_pgr_136 3 5 0.000000844425
Punica granatum NC_045130.1 2 CH_pgr_374 2 2 0.000750356
Physcomitrium patens Chr24 2 CH_ppa_311 2 2 0.000612726
Populus trichocarpa Chr03 2 CH_ptr_456 2 2 0.000346801
Quercus lobata CM012294 2 CH_qlo_694 2 2 0.0000516289
Salix brachista GWHAAZH00000003 2 CH_sbr_305 2 2 0.000189042
Sequoiadendron giganteum chr8 2 CH_sgi_459 3 3 0.0000000142393
Selaginella moellendorffii scaffold_38 2 CH_smo_153 2 2 0.000560224
Theobroma cacao Chromosome_3 2 CH_tca_74 4 8 0.0000000000824943
Tripterygium wilfordii NC_052246.1 2 CH_twi_186 2 2 0.0000557507

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001