Functional clusters
Information
- Type MapMan
- Description Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-glucose 4-epimerase
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Amborella trichopoda | AmTr_v1.0_scaffold00024 | 1 | CH_atr_261 | 2 | 2 | 0.000238322 |
Olea europaea | chr4 | 1 | CH_oeu_189 | 2 | 2 | 0.0000533789 |
Punica granatum | NC_045130.1 | 1 | CH_pgr_340 | 2 | 2 | 0.000450214 |
Pisum sativum | chr1LG6 | 1 | CH_psa_166 | 3 | 7 | 0.00000499793 |
Vitis vinifera | chr2 | 1 | CH_vvi_418 | 2 | 3 | 0.000684523 |
Amborella trichopoda | AmTr_v1.0_scaffold00024 | 2 | CH_atr_261 | 2 | 2 | 0.000238322 |
Olea europaea | chr4 | 2 | CH_oeu_189 | 2 | 2 | 0.0000533789 |
Punica granatum | NC_045130.1 | 2 | CH_pgr_340 | 2 | 2 | 0.000450214 |
Pisum sativum | chr1LG6 | 2 | CH_psa_166 | 3 | 7 | 0.00000499793 |
Vitis vinifera | chr2 | 2 | CH_vvi_418 | 2 | 3 | 0.000684523 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |