Functional clusters

Information

  • Type MapMan
  • Description Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-glucose 4-epimerase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00024 1 CH_atr_261 2 2 0.000238322
Olea europaea chr4 1 CH_oeu_189 2 2 0.0000533789
Punica granatum NC_045130.1 1 CH_pgr_340 2 2 0.000450214
Pisum sativum chr1LG6 1 CH_psa_166 3 7 0.00000499793
Vitis vinifera chr2 1 CH_vvi_418 2 3 0.000684523
Amborella trichopoda AmTr_v1.0_scaffold00024 2 CH_atr_261 2 2 0.000238322
Olea europaea chr4 2 CH_oeu_189 2 2 0.0000533789
Punica granatum NC_045130.1 2 CH_pgr_340 2 2 0.000450214
Pisum sativum chr1LG6 2 CH_psa_166 3 7 0.00000499793
Vitis vinifera chr2 2 CH_vvi_418 2 3 0.000684523

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001