Functional clusters

Information

  • Type MapMan
  • Description Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-galacturonic acid biosynthesis.salvage biosynthesis.galacturonokinase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Hydrangea macrophylla Hma1.2p1_0022F.1 1 CH_hma_234 2 2 0.000111086
Sequoiadendron giganteum chr4 1 CH_sgi_407 3 3 0.00000000355983
Vanilla planifolia CM028150.1 1 CH_vpl_225 3 52 0.000180659
Hydrangea macrophylla Hma1.2p1_0022F.1 2 CH_hma_234 2 2 0.000111086
Sequoiadendron giganteum chr4 2 CH_sgi_407 3 3 0.00000000355983
Vanilla planifolia CM028150.1 2 CH_vpl_225 3 52 0.000180659

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001