Functional clusters

Information

  • Type MapMan
  • Description Carbohydrate metabolism.nucleotide sugar biosynthesis.GDP-L-fucose biosynthesis.de novo biosynthesis.GDP-L-fucose synthase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold1190 1 CH_can_96 3 3 0.0000000102372
Carica papaya supercontig_43 1 CH_cpa_217 2 2 0.0000950661
Lonicera japonica GWHAAZE00000009 1 CH_lonja_519 2 4 0.000359303
Oryza sativa ssp. japonica chr06 1 CH_osa_211 2 2 0.0000528123
Capsicum annuum PGAv.1.6.scaffold1190 2 CH_can_96 3 3 0.0000000102372
Carica papaya supercontig_43 2 CH_cpa_217 2 2 0.0000950661
Lonicera japonica GWHAAZE00000009 2 CH_lonja_519 2 4 0.000359303
Oryza sativa ssp. japonica chr06 2 CH_osa_211 2 2 0.0000528123

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001