Functional clusters

Information

  • Type MapMan
  • Description Carbohydrate metabolism.fermentation.lactic acid fermentation.L-lactate dehydrogenase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr9 1 CH_acertr_340 2 2 0.000070497
Camellia sinensis var. sinensis Chr14 1 CH_camsi_778 2 3 0.000412677
Cannabis sativa NC_044374.1 1 CH_cansat_242 2 2 0.0000656642
Coffea canephora chr8 1 CH_ccan_312 2 14 0.000387551
Eutrema salsugineum scaffold_1 1 CH_esa_189 2 2 0.0000761499
Nelumbo nucifera chr6 1 CH_nnu_287 2 3 0.0000436015
Pisum sativum chr4LG4 1 CH_psa_367 2 3 0.000469451
Quercus lobata 12 1 CH_qlo_317 3 3 0.00000000399842
Salvia bowleyana GWHASIU00000002 1 CH_sbo_323 2 3 0.000136491
Sequoiadendron giganteum chr4 1 CH_sgi_535 3 4 0.000000142385
Tripterygium wilfordii NC_052247.1 1 CH_twi_182 2 2 0.0000557507
Utricularia gibba unitig_0 1 CH_ugi_246 2 4 0.000440723
Zea mays 5 1 CH_zma_160 2 2 0.0000511313
Acer truncatum chr9 2 CH_acertr_340 2 2 0.000070497
Camellia sinensis var. sinensis Chr14 2 CH_camsi_778 2 3 0.000412677
Cannabis sativa NC_044374.1 2 CH_cansat_242 2 2 0.0000656642
Coffea canephora chr8 2 CH_ccan_312 2 14 0.000387551
Eutrema salsugineum scaffold_1 2 CH_esa_189 2 2 0.0000761499
Nelumbo nucifera chr6 2 CH_nnu_287 2 3 0.0000436015
Pisum sativum chr4LG4 2 CH_psa_367 2 3 0.000469451
Quercus lobata 12 2 CH_qlo_317 3 3 0.00000000399842
Salvia bowleyana GWHASIU00000002 2 CH_sbo_323 2 3 0.000136491
Sequoiadendron giganteum chr4 2 CH_sgi_535 3 4 0.000000142385
Tripterygium wilfordii NC_052247.1 2 CH_twi_182 2 2 0.0000557507
Utricularia gibba unitig_0 2 CH_ugi_246 2 4 0.000440723
Zea mays 5 2 CH_zma_160 2 2 0.0000511313

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001