Functional clusters

Information

  • Type MapMan
  • Description Carbohydrate metabolism.sucrose metabolism.degradation.fructose kinase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr1 1 CH_ath_408 2 2 0.000601633
Amborella trichopoda AmTr_v1.0_scaffold00006 1 CH_atr_308 2 2 0.000476644
Citrus clementina scaffold_3 1 CH_ccl_493 2 2 0.000820311
Carica papaya supercontig_21 1 CH_cpa_313 2 2 0.000285198
Daucus carota DCARv2_Chr7 1 CH_dca_440 2 2 0.000637775
Magnolia biondii Chr11 1 CH_mbi_647 2 2 0.000728491
Punica granatum NC_045130.1 1 CH_pgr_334 2 2 0.000450214
Papaver somniferum NC_039358.1 1 CH_pso_421 3 8 0.0000566297
Papaver somniferum NW_020620714.1 1 CH_pso_451 4 61 0.000106065
Salvia bowleyana GWHASIU00000002 1 CH_sbo_455 2 2 0.00068247
Simmondsia chinensis GWHAASQ00000025 1 CH_sci_268 2 2 0.000510856
Sechium edule LG07 1 CH_sed_94 3 3 0.000000267217
Sequoiadendron giganteum chr4 1 CH_sgi_268 4 4 0.00000000000520279
Arabidopsis thaliana Chr1 2 CH_ath_408 2 2 0.000601633
Amborella trichopoda AmTr_v1.0_scaffold00006 2 CH_atr_308 2 2 0.000476644
Citrus clementina scaffold_3 2 CH_ccl_493 2 2 0.000820311
Carica papaya supercontig_21 2 CH_cpa_313 2 2 0.000285198
Daucus carota DCARv2_Chr7 2 CH_dca_440 2 2 0.000637775
Magnolia biondii Chr11 2 CH_mbi_647 2 2 0.000728491
Punica granatum NC_045130.1 2 CH_pgr_334 2 2 0.000450214
Papaver somniferum NC_039358.1 2 CH_pso_421 3 8 0.0000566297
Papaver somniferum NW_020620714.1 2 CH_pso_451 4 61 0.000106065
Salvia bowleyana GWHASIU00000002 2 CH_sbo_455 2 2 0.00068247
Simmondsia chinensis GWHAASQ00000025 2 CH_sci_268 2 2 0.000510856
Sechium edule LG07 2 CH_sed_94 3 3 0.000000267217
Sequoiadendron giganteum chr4 2 CH_sgi_268 4 4 0.00000000000520279

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001