Functional clusters

Information

  • Type MapMan
  • Description Carbohydrate metabolism.sucrose metabolism.biosynthesis.sucrose-phosphate phosphatase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr12 1 CH_acertr_109 3 3 0.00000002982
Aquilegia oxysepala CHR07 1 CH_aox_343 2 2 0.000801989
Aquilegia oxysepala CHR01 1 CH_aox_92 3 5 0.000000964625
Brassica oleracea C5 1 CH_bol_434 2 2 0.000915212
Camellia sinensis var. sinensis Chr13 1 CH_camsi_629 2 3 0.000137561
Malus domestica Chr02 1 CH_mdo_576 2 2 0.000227527
Quercus lobata 7 1 CH_qlo_1056 2 3 0.000929264
Quercus lobata 4 1 CH_qlo_900 2 2 0.000309773
Rhododendron simsii chr07 1 CH_rsi_452 2 2 0.000193592
Sequoiadendron giganteum chr3 1 CH_sgi_1280 2 3 0.000438418
Trochodendron aralioides group1 1 CH_tar_380 2 2 0.00018011
Trifolium pratense Tp57577_TGAC_v2_LG7 1 CH_tpr_417 2 2 0.000756974
Acer truncatum chr12 2 CH_acertr_109 3 3 0.00000002982
Aquilegia oxysepala CHR07 2 CH_aox_343 2 2 0.000801989
Aquilegia oxysepala CHR01 2 CH_aox_92 3 5 0.000000964625
Brassica oleracea C5 2 CH_bol_434 2 2 0.000915212
Camellia sinensis var. sinensis Chr13 2 CH_camsi_629 2 3 0.000137561
Malus domestica Chr02 2 CH_mdo_576 2 2 0.000227527
Quercus lobata 7 2 CH_qlo_1056 2 3 0.000929264
Quercus lobata 4 2 CH_qlo_900 2 2 0.000309773
Rhododendron simsii chr07 2 CH_rsi_452 2 2 0.000193592
Sequoiadendron giganteum chr3 2 CH_sgi_1280 2 3 0.000438418
Trochodendron aralioides group1 2 CH_tar_380 2 2 0.00018011
Trifolium pratense Tp57577_TGAC_v2_LG7 2 CH_tpr_417 2 2 0.000756974

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001