Functional clusters

Information

  • Type MapMan
  • Description Carbohydrate metabolism.sucrose metabolism.biosynthesis.cytosolic UDP-glucose pyrophosphorylase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Coffea canephora chr2 1 CH_ccan_232 2 6 0.0000894371
Chenopodium quinoa C_Quinoa_Scaffold_2370 1 CH_cqu_377 2 2 0.000142146
Lupinus albus Lalb_Chr18 1 CH_lal_320 2 2 0.000314895
Petunia axillaris Peaxi162Scf00063 1 CH_pax_339 2 5 0.000703482
Sequoiadendron giganteum chr9 1 CH_sgi_928 2 2 0.0000487151
Coffea canephora chr2 2 CH_ccan_232 2 6 0.0000894371
Chenopodium quinoa C_Quinoa_Scaffold_2370 2 CH_cqu_377 2 2 0.000142146
Lupinus albus Lalb_Chr18 2 CH_lal_320 2 2 0.000314895
Petunia axillaris Peaxi162Scf00063 2 CH_pax_339 2 5 0.000703482
Sequoiadendron giganteum chr9 2 CH_sgi_928 2 2 0.0000487151

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001