Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.pathogen.defense mechanisms.systemic acquired resistance (SAR).pipecolic acid metabolism.cyclodeaminase (SARD4)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR05 1 CH_aox_86 3 8 0.00000054019
Carpinus fangiana Cfa06 1 CH_cfa_89 3 4 0.0000000344144
Nelumbo nucifera chr6 1 CH_nnu_276 2 2 0.0000436015
Quercus lobata 9 1 CH_qlo_861 2 4 0.000309757
Solanum tuberosum ST4.03ch06 1 CH_stu_364 2 2 0.0000512453
Aquilegia oxysepala CHR05 2 CH_aox_86 3 8 0.00000054019
Carpinus fangiana Cfa06 2 CH_cfa_89 3 4 0.0000000344144
Nelumbo nucifera chr6 2 CH_nnu_276 2 2 0.0000436015
Quercus lobata 9 2 CH_qlo_861 2 4 0.000309757
Solanum tuberosum ST4.03ch06 2 CH_stu_364 2 2 0.0000512453

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001