Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.pathogen.defense mechanisms.systemic acquired resistance (SAR).regulatory protein (NPR1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC09 1 CH_bca_1139 2 3 0.000961902
Brassica rapa A01 1 CH_bra_371 2 3 0.000772726
Eutrema salsugineum scaffold_1 1 CH_esa_305 2 3 0.000685305
Papaver somniferum NC_039359.1 1 CH_pso_233 3 5 0.0000000760913
Papaver somniferum NC_039359.1 1 CH_pso_536 2 2 0.000225233
Rhododendron simsii chr05 1 CH_rsi_219 3 9 0.000000524606
Brassica carinata ChrC09 2 CH_bca_1139 2 3 0.000961902
Brassica rapa A01 2 CH_bra_371 2 3 0.000772726
Eutrema salsugineum scaffold_1 2 CH_esa_305 2 3 0.000685305
Papaver somniferum NC_039359.1 2 CH_pso_233 3 5 0.0000000760913
Papaver somniferum NC_039359.1 2 CH_pso_536 2 2 0.000225233
Rhododendron simsii chr05 2 CH_rsi_219 3 9 0.000000524606

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001