Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.pathogen.effector-triggered immunity (ETI) network.EDS1-PAD4/SAG101 signalling heterodimers.component SAG101

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrB08 1 CH_bca_1138 2 3 0.000961902
Brassica napus C03 1 CH_bna_169 3 3 0.0000000289095
Brassica oleracea C3 1 CH_bol_230 2 2 0.0000326861
Brassica rapa A10 1 CH_bra_301 2 3 0.000386368
Cicer arietinum L. Ca_LG2_v3 1 CH_car_295 2 3 0.000700425
Cardamine hirsuta Chr6 1 CH_chi_235 2 2 0.0000691204
Carya illinoinensis Chr03 1 CH_cil_356 2 2 0.0000619828
Citrullus lanatus CG_Chr10 1 CH_cla_122 2 2 0.0000887115
Daucus carota DCARv2_Chr2 1 CH_dca_306 2 2 0.000191333
Erigeron canadensis Conyza_canadensis_scaffold:2 1 CH_eca_504 2 3 0.000807658
Eucalyptus grandis Chr09 1 CH_egr_83 8 31 5.84533e-21
Eutrema salsugineum scaffold_2 1 CH_esa_247 2 2 0.00022845
Fragaria vesca Fvb6 1 CH_fve_431 2 3 0.000530165
Helianthus annuus HanXRQChr03 1 CH_han_641 2 2 0.000386429
Lotus japonicus chr2 1 CH_lja_53 4 5 0.0000000000274245
Lonicera japonica GWHAAZE00000094 1 CH_lonja_186 3 5 0.0000000537959
Lactuca sativa Lsat_1_v8_lg_4 1 CH_lsa_79 4 6 0.00000000000611125
Malus domestica Chr17 1 CH_mdo_205 3 3 0.000000120796
Malus domestica Chr09 1 CH_mdo_73 5 14 0.00000000000173792
Medicago truncatula chr6 1 CH_mtr_108 5 11 0.000000000000207311
Nelumbo nucifera chr3 1 CH_nnu_279 2 2 0.0000436015
Punica granatum NC_045128.1 1 CH_pgr_104 3 5 0.000000084452
Pisum sativum chr1LG6 1 CH_psa_159 3 19 0.00000395347
Quercus lobata CM012294 1 CH_qlo_116 6 10 0.00000000000000160094
Rhododendron simsii chr10 1 CH_rsi_246 3 15 0.00000284107
Schrenkiella parvula ch6-6 1 CH_spa_170 2 2 0.000078734
Trochodendron aralioides group0 1 CH_tar_317 2 3 0.000180104
Trifolium pratense Tp57577_TGAC_v2_LG2 1 CH_tpr_366 2 2 0.000454184
Vigna mungo CM024077.1 1 CH_vmu_203 2 2 0.0000646141
Vitis vinifera chr5 1 CH_vvi_384 2 2 0.000456378
Brassica carinata ChrB08 2 CH_bca_1138 2 3 0.000961902
Brassica oleracea C3 2 CH_bol_230 2 2 0.0000326861
Brassica rapa A10 2 CH_bra_301 2 3 0.000386368
Cicer arietinum L. Ca_LG2_v3 2 CH_car_295 2 3 0.000700425
Cardamine hirsuta Chr6 2 CH_chi_235 2 2 0.0000691204
Carya illinoinensis Chr03 2 CH_cil_356 2 2 0.0000619828
Citrullus lanatus CG_Chr10 2 CH_cla_122 2 2 0.0000887115
Daucus carota DCARv2_Chr2 2 CH_dca_306 2 2 0.000191333
Erigeron canadensis Conyza_canadensis_scaffold:2 2 CH_eca_504 2 3 0.000807658
Eucalyptus grandis Chr09 2 CH_egr_83 8 31 5.84533e-21
Eutrema salsugineum scaffold_2 2 CH_esa_247 2 2 0.00022845
Fragaria vesca Fvb6 2 CH_fve_431 2 3 0.000530165
Helianthus annuus HanXRQChr03 2 CH_han_641 2 2 0.000386429
Lotus japonicus chr2 2 CH_lja_53 4 5 0.0000000000274245
Lonicera japonica GWHAAZE00000094 2 CH_lonja_186 3 5 0.0000000537959
Lactuca sativa Lsat_1_v8_lg_4 2 CH_lsa_79 4 6 0.00000000000611125
Malus domestica Chr17 2 CH_mdo_205 3 3 0.000000120796
Malus domestica Chr09 2 CH_mdo_73 5 14 0.00000000000173792
Nelumbo nucifera chr3 2 CH_nnu_279 2 2 0.0000436015
Punica granatum NC_045128.1 2 CH_pgr_104 3 5 0.000000084452
Pisum sativum chr1LG6 2 CH_psa_159 3 19 0.00000395347
Quercus lobata CM012294 2 CH_qlo_116 6 10 0.00000000000000160094
Rhododendron simsii chr10 2 CH_rsi_246 3 15 0.00000284107
Schrenkiella parvula ch6-6 2 CH_spa_170 2 2 0.000078734
Trochodendron aralioides group0 2 CH_tar_317 2 3 0.000180104
Trifolium pratense Tp57577_TGAC_v2_LG2 2 CH_tpr_366 2 2 0.000454184
Vigna mungo CM024077.1 2 CH_vmu_203 2 2 0.0000646141
Vitis vinifera chr5 2 CH_vvi_384 2 2 0.000456378

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001