Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.salinity.SOS (Salt Overly Sensitive) signalling pathway.SOS3-SOS2 signalling.calcium-dependent SOS2 activator (SOS3)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Olea europaea chr11 1 CH_oeu_364 2 5 0.000533746
Oryza sativa ssp. japonica chr02 1 CH_osa_210 2 2 0.0000528123
Punica granatum NC_045130.1 1 CH_pgr_348 2 3 0.000675279
Populus trichocarpa Chr15 1 CH_ptr_378 2 2 0.0001734
Quercus lobata 9 1 CH_qlo_667 2 2 0.0000516289
Olea europaea chr11 2 CH_oeu_364 2 5 0.000533746
Oryza sativa ssp. japonica chr02 2 CH_osa_210 2 2 0.0000528123
Punica granatum NC_045130.1 2 CH_pgr_348 2 3 0.000675279
Populus trichocarpa Chr15 2 CH_ptr_378 2 2 0.0001734
Quercus lobata 9 2 CH_qlo_667 2 2 0.0000516289

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001