Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.temperature.cold response.cold-responsive protein kinase (CRPK)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica rapa A09 1 CH_bra_280 2 2 0.000257588
Helianthus annuus HanXRQChr15 1 CH_han_590 2 2 0.000231857
Lactuca sativa Lsat_1_v8_lg_7 1 CH_lsa_341 2 2 0.0000514007
Sequoiadendron giganteum chr8 1 CH_sgi_1136 2 2 0.000146145
Brassica rapa A09 2 CH_bra_280 2 2 0.000257588
Helianthus annuus HanXRQChr15 2 CH_han_590 2 2 0.000231857
Lactuca sativa Lsat_1_v8_lg_7 2 CH_lsa_341 2 2 0.0000514007
Sequoiadendron giganteum chr8 2 CH_sgi_1136 2 2 0.000146145

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001