Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.temperature

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group11 1 CH_ach_64 4 13 0.00000600605
Camellia sinensis var. sinensis Chr2 1 CH_camsi_948 3 8 0.000873788
Actinidia chinensis Lachesis_group11 2 CH_ach_64 4 13 0.00000600605
Camellia sinensis var. sinensis Chr2 2 CH_camsi_948 3 8 0.000873788

Available child term results

Ontology identifier Description Number of clusters
26.4.1.1 External stimuli response.temperature.sensing and signalling.temperature sensor protein (CNGC2) 20
26.4.2.1 External stimuli response.temperature.heat response.transcriptional regulator (HsfA1) 4
26.4.2.2 External stimuli response.temperature.heat response.monogalactosyldiacylglycerol lipase (HIL1) 12
26.4.2.3 External stimuli response.temperature.heat response.cytosolic chaperone (Hsp101) 10
26.4.2.4 External stimuli response.temperature.heat response.organellar chaperone (Clp-p/Clp-m) 6
26.4.3.2 External stimuli response.temperature.cold response.cold-responsive mRNA chaperone (CSD) 12
26.4.3.3 External stimuli response.temperature.cold response.cold-responsive protein kinase (CRPK) 8
26.4.3.4.1 External stimuli response.temperature.cold response.ICE-CBF cold acclimation transcriptional cascade.transcription factor (ICE1/2) 4
26.4.3.4.2 External stimuli response.temperature.cold response.ICE-CBF cold acclimation transcriptional cascade.transcription factor (CBF/DREB1) 50

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001