Functional clusters

Information

  • Type MapMan
  • Description Nutrient uptake.metal homeostasis.iron.iron storage.non-haem ferritin

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_4 1 CH_aly_415 2 2 0.000660044
Camellia sinensis var. sinensis Chr4 1 CH_camsi_60 6 22 0.000000000000028558
Carpinus fangiana Cfa01 1 CH_cfa_300 2 2 0.000227204
Gossypium raimondii Chr12 1 CH_gra_441 2 2 0.00080416
Papaver somniferum NW_020620381.1 1 CH_pso_455 3 27 0.000124485
Papaver somniferum NW_020647304.1 1 CH_pso_650 2 2 0.000630652
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_325 2 2 0.000278772
Vitis vinifera chr8 1 CH_vvi_382 2 2 0.000456378
Arabidopsis lyrata scaffold_4 2 CH_aly_415 2 2 0.000660044
Camellia sinensis var. sinensis Chr4 2 CH_camsi_60 6 22 0.000000000000028558
Carpinus fangiana Cfa01 2 CH_cfa_300 2 2 0.000227204
Gossypium raimondii Chr12 2 CH_gra_441 2 2 0.00080416
Papaver somniferum NW_020620381.1 2 CH_pso_455 3 27 0.000124485
Papaver somniferum NW_020647304.1 2 CH_pso_650 2 2 0.000630652
Vaccinium macrocarpon chr5_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_325 2 2 0.000278772
Vitis vinifera chr8 2 CH_vvi_382 2 2 0.000456378

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001