Functional clusters

Information

  • Type MapMan
  • Description Nutrient uptake.metal homeostasis.iron.chelation-based strategy uptake.iron-mobilizing coumarin biosynthesis.scopoletin 8-hydroxylase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR01 1 CH_aox_144 2 2 0.0000801989
Citrus clementina scaffold_9 1 CH_ccl_367 2 3 0.000246083
Durio zibethinus NW_019167993.1 1 CH_dzi_5 7 14 2.14359e-20
Gossypium hirsutum D01 1 CH_ghi_152 4 6 0.000000000612422
Gossypium hirsutum A01 1 CH_ghi_167 4 7 0.00000000142883
Gossypium raimondii Chr02 1 CH_gra_84 4 6 0.000000000242656
Helianthus annuus HanXRQChr05 1 CH_han_164 5 35 0.000000000682422
Helianthus annuus HanXRQChr09 1 CH_han_245 3 3 0.000000188156
Hydrangea macrophylla Hma1.2p1_0637F.1 1 CH_hma_406 2 3 0.000999685
Lactuca sativa Lsat_1_v8_lg_7 1 CH_lsa_190 3 4 0.000000158516
Lactuca sativa Lsat_1_v8_lg_5 1 CH_lsa_487 2 2 0.000514007
Manihot esculenta Chromosome06 1 CH_mes_405 2 2 0.000366379
Manihot esculenta Chromosome14 1 CH_mes_406 2 2 0.000366379
Trochodendron aralioides group3 1 CH_tar_419 2 2 0.00036022
Theobroma cacao Chromosome_7 1 CH_tca_61 4 6 0.0000000000176786
Aquilegia oxysepala CHR01 2 CH_aox_144 2 2 0.0000801989
Citrus clementina scaffold_9 2 CH_ccl_367 2 3 0.000246083
Durio zibethinus NW_019167993.1 2 CH_dzi_5 7 14 2.14359e-20
Gossypium hirsutum D01 2 CH_ghi_152 4 6 0.000000000612422
Gossypium hirsutum A01 2 CH_ghi_167 4 7 0.00000000142883
Gossypium raimondii Chr02 2 CH_gra_84 4 6 0.000000000242656
Helianthus annuus HanXRQChr05 2 CH_han_164 5 35 0.000000000682422
Helianthus annuus HanXRQChr09 2 CH_han_245 3 3 0.000000188156
Hydrangea macrophylla Hma1.2p1_0637F.1 2 CH_hma_406 2 3 0.000999685
Lactuca sativa Lsat_1_v8_lg_7 2 CH_lsa_190 3 4 0.000000158516
Lactuca sativa Lsat_1_v8_lg_5 2 CH_lsa_487 2 2 0.000514007
Manihot esculenta Chromosome06 2 CH_mes_405 2 2 0.000366379
Manihot esculenta Chromosome14 2 CH_mes_406 2 2 0.000366379
Trochodendron aralioides group3 2 CH_tar_419 2 2 0.00036022
Theobroma cacao Chromosome_7 2 CH_tca_61 4 6 0.0000000000176786

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001