Functional clusters

Information

  • Type MapMan
  • Description Nutrient uptake.nitrogen assimilation.aspartate aminotransferase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 1 CH_arhy_701 2 2 0.000628705
Cannabis sativa NC_044370.1 1 CH_cansat_206 3 15 0.0000587825
Corchorus olitorius AWUE01016488.1 1 CH_col_124 2 2 0.000876296
Eutrema salsugineum scaffold_10 1 CH_esa_37 5 7 0.0000000000013344
Fragaria x ananassa Fvb2-4 1 CH_fan_640 2 2 0.000832663
Fragaria x ananassa Fvb2-1 1 CH_fan_641 2 2 0.000832663
Fragaria vesca Fvb2 1 CH_fve_417 2 2 0.000353461
Manihot esculenta Chromosome03 1 CH_mes_505 2 2 0.000915947
Physcomitrium patens Chr21 1 CH_ppa_309 2 2 0.000612726
Prunus persica Pp01 1 CH_ppe_474 2 2 0.000447577
Rosa chinensis RcHm_v2.0_Chr6 1 CH_rch_679 2 2 0.000239192
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 2 CH_arhy_701 2 2 0.000628705
Cannabis sativa NC_044370.1 2 CH_cansat_206 3 15 0.0000587825
Corchorus olitorius AWUE01016488.1 2 CH_col_124 2 2 0.000876296
Eutrema salsugineum scaffold_10 2 CH_esa_37 5 7 0.0000000000013344
Fragaria x ananassa Fvb2-4 2 CH_fan_640 2 2 0.000832663
Fragaria x ananassa Fvb2-1 2 CH_fan_641 2 2 0.000832663
Fragaria vesca Fvb2 2 CH_fve_417 2 2 0.000353461
Manihot esculenta Chromosome03 2 CH_mes_505 2 2 0.000915947
Physcomitrium patens Chr21 2 CH_ppa_309 2 2 0.000612726
Prunus persica Pp01 2 CH_ppe_474 2 2 0.000447577
Rosa chinensis RcHm_v2.0_Chr6 2 CH_rch_679 2 2 0.000239192

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001