Functional clusters

Information

  • Type MapMan
  • Description Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamine synthetase activities.cytosolic glutamine synthetase (GLN1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Physcomitrium patens Chr18 1 CH_ppa_238 2 2 0.000367636
Phaseolus vulgaris Chr08 1 CH_pvu_412 2 2 0.000440836
Sequoiadendron giganteum chr2 1 CH_sgi_860 2 2 0.0000487151
Selenicereus undatus Scaffold_33679 1 CH_sun_55 3 6 0.000000633506
Trochodendron aralioides group8 1 CH_tar_435 2 2 0.00036022
Vigna mungo CM024073.1 1 CH_vmu_340 2 2 0.000387685
Physcomitrium patens Chr18 2 CH_ppa_238 2 2 0.000367636
Phaseolus vulgaris Chr08 2 CH_pvu_412 2 2 0.000440836
Sequoiadendron giganteum chr2 2 CH_sgi_860 2 2 0.0000487151
Selenicereus undatus Scaffold_33679 2 CH_sun_55 3 6 0.000000633506
Trochodendron aralioides group8 2 CH_tar_435 2 2 0.00036022
Vigna mungo CM024073.1 2 CH_vmu_340 2 2 0.000387685

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001