Functional clusters

Information

  • Type MapMan
  • Description Solute transport.channels.VIC superfamily.voltage-gated calcium cation channel (TPC)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_18782_HRSCAF_18867 1 CH_ama_10 4 8 0.000000000134602
Amborella trichopoda AmTr_v1.0_scaffold00068 1 CH_atr_202 2 2 0.0000794407
Cicer arietinum L. Ca_LG1_v3 1 CH_car_173 2 2 0.0000778301
Carya illinoinensis Chr04 1 CH_cil_437 2 2 0.000185948
Daucus carota DCARv2_Chr4 1 CH_dca_373 2 2 0.000382665
Nelumbo nucifera chr1 1 CH_nnu_67 3 4 0.0000000028517
Petunia axillaris Peaxi162Scf00132 1 CH_pax_238 2 3 0.00021106
Quercus lobata 8 1 CH_qlo_381 3 5 0.0000000399821
Rosa chinensis RcHm_v2.0_Chr2 1 CH_rch_559 2 3 0.000119593
Salix brachista GWHAAZH00000013 1 CH_sbr_236 2 2 0.000063014
Trochodendron aralioides group9 1 CH_tar_80 3 3 0.00000000540676
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_263 2 2 0.0000929238
Avicennia marina ScioBoG_18782_HRSCAF_18867 2 CH_ama_10 4 8 0.000000000134602
Amborella trichopoda AmTr_v1.0_scaffold00068 2 CH_atr_202 2 2 0.0000794407
Cicer arietinum L. Ca_LG1_v3 2 CH_car_173 2 2 0.0000778301
Carya illinoinensis Chr04 2 CH_cil_437 2 2 0.000185948
Daucus carota DCARv2_Chr4 2 CH_dca_373 2 2 0.000382665
Eucalyptus grandis Chr11 2 CH_egr_349 3 3 0.00000000513834
Gossypium hirsutum D02 2 CH_ghi_500 2 3 0.0000801047
Nelumbo nucifera chr1 2 CH_nnu_67 3 4 0.0000000028517
Petunia axillaris Peaxi162Scf00132 2 CH_pax_238 2 3 0.00021106
Quercus lobata 8 2 CH_qlo_381 3 5 0.0000000399821
Rosa chinensis RcHm_v2.0_Chr2 2 CH_rch_559 2 3 0.000119593
Salix brachista GWHAAZH00000013 2 CH_sbr_236 2 2 0.000063014
Trochodendron aralioides group9 2 CH_tar_80 3 3 0.00000000540676
Vaccinium macrocarpon chr11_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_263 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001