Functional clusters

Information

  • Type MapMan
  • Description Solute transport.channels.MIP family.X-intrinsic protein (XIP)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr5 1 CH_acertr_392 2 3 0.000211484
Avicennia marina ScioBoG_94932_HRSCAF_95134 1 CH_ama_21 3 4 0.000000111508
Aquilegia oxysepala CHR06 1 CH_aox_299 2 2 0.000481193
Camellia sinensis var. sinensis Chr6 1 CH_camsi_665 2 2 0.000137564
Cannabis sativa NC_044370.1 1 CH_cansat_238 2 2 0.0000656642
Corylus avellana 1 1 CH_cav_275 2 2 0.0000766695
Coffea canephora chr2 1 CH_ccan_353 2 11 0.000702697
Citrus clementina scaffold_8 1 CH_ccl_328 2 2 0.0000820311
Carpinus fangiana Cfa02 1 CH_cfa_287 2 3 0.000227195
Corchorus olitorius AWUE01016323.1 1 CH_col_88 2 2 0.000292099
Carica papaya supercontig_37 1 CH_cpa_231 2 2 0.0000950661
Durio zibethinus NW_019167915.1 1 CH_dzi_71 3 3 0.0000000128896
Fragaria x ananassa Fvb2-4 1 CH_fan_105 3 4 0.0000000205427
Glycine max Gm12 1 CH_gma_389 2 2 0.000113867
Gossypium raimondii Chr08 1 CH_gra_318 2 2 0.000160832
Helianthus annuus HanXRQChr10 1 CH_han_443 2 2 0.0000386429
Lupinus albus Lalb_Chr01 1 CH_lal_213 2 2 0.0000524824
Lonicera japonica GWHAAZE00000005 1 CH_lonja_397 2 2 0.0000598874
Magnolia biondii Chr05 1 CH_mbi_565 2 3 0.000437077
Manihot esculenta Chromosome11 1 CH_mes_152 3 3 0.0000000223729
Medicago truncatula chr4 1 CH_mtr_588 2 3 0.000123256
Prunus persica Pp08 1 CH_ppe_348 2 2 0.0000745962
Papaver somniferum NC_039358.1 1 CH_pso_486 2 2 0.00013514
Populus trichocarpa Chr09 1 CH_ptr_47 5 5 5.02346e-16
Phaseolus vulgaris Chr11 1 CH_pvu_300 2 2 0.0000734727
Quercus lobata 11 1 CH_qlo_63 6 8 2.3115e-19
Rosa chinensis RcHm_v2.0_Chr6 1 CH_rch_49 6 14 6.80343e-18
Rhododendron simsii chr05 1 CH_rsi_362 2 2 0.0000645307
Salix brachista GWHAAZH00000009 1 CH_sbr_92 3 4 0.0000000238246
Solanum lycopersicum SL4.0ch10 1 CH_sly_43 5 5 5.34153e-16
Solanum pennellii Spenn-ch10 1 CH_spe_54 4 5 0.00000000000659993
Solanum tuberosum ST4.03ch10 1 CH_stu_77 4 4 0.00000000000201876
Theobroma cacao Chromosome_2 1 CH_tca_116 3 3 0.00000000804614
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_357 2 4 0.000557491
Vigna mungo CM024076.1 1 CH_vmu_218 2 2 0.0000646141
Acer truncatum chr5 2 CH_acertr_392 2 3 0.000211484
Avicennia marina ScioBoG_94932_HRSCAF_95134 2 CH_ama_21 3 4 0.000000111508
Aquilegia oxysepala CHR06 2 CH_aox_299 2 2 0.000481193
Camellia sinensis var. sinensis Chr6 2 CH_camsi_665 2 2 0.000137564
Cannabis sativa NC_044370.1 2 CH_cansat_238 2 2 0.0000656642
Corylus avellana 1 2 CH_cav_275 2 2 0.0000766695
Coffea canephora chr2 2 CH_ccan_353 2 11 0.000702697
Citrus clementina scaffold_8 2 CH_ccl_328 2 2 0.0000820311
Carpinus fangiana Cfa02 2 CH_cfa_287 2 3 0.000227195
Corchorus olitorius AWUE01016323.1 2 CH_col_88 2 2 0.000292099
Carica papaya supercontig_37 2 CH_cpa_231 2 2 0.0000950661
Durio zibethinus NW_019167915.1 2 CH_dzi_71 3 3 0.0000000128896
Fragaria x ananassa Fvb2-4 2 CH_fan_105 3 4 0.0000000205427
Gossypium hirsutum A12 2 CH_ghi_716 2 2 0.000400523
Gossypium hirsutum D12 2 CH_ghi_717 2 2 0.000400523
Glycine max Gm12 2 CH_gma_389 2 2 0.000113867
Gossypium raimondii Chr08 2 CH_gra_318 2 2 0.000160832
Helianthus annuus HanXRQChr10 2 CH_han_443 2 2 0.0000386429
Lupinus albus Lalb_Chr01 2 CH_lal_213 2 2 0.0000524824
Lotus japonicus chr3 2 CH_lja_279 2 2 0.0000715077
Lonicera japonica GWHAAZE00000005 2 CH_lonja_397 2 2 0.0000598874
Magnolia biondii Chr05 2 CH_mbi_565 2 3 0.000437077
Manihot esculenta Chromosome11 2 CH_mes_152 3 3 0.0000000223729
Prunus persica Pp08 2 CH_ppe_348 2 2 0.0000745962
Papaver somniferum NC_039358.1 2 CH_pso_486 2 2 0.00013514
Populus trichocarpa Chr09 2 CH_ptr_47 5 5 5.02346e-16
Phaseolus vulgaris Chr11 2 CH_pvu_300 2 2 0.0000734727
Quercus lobata 11 2 CH_qlo_63 6 8 2.3115e-19
Rosa chinensis RcHm_v2.0_Chr6 2 CH_rch_49 6 14 6.80343e-18
Rhododendron simsii chr05 2 CH_rsi_362 2 2 0.0000645307
Salix brachista GWHAAZH00000009 2 CH_sbr_92 3 4 0.0000000238246
Solanum lycopersicum SL4.0ch10 2 CH_sly_43 5 5 5.34153e-16
Solanum pennellii Spenn-ch10 2 CH_spe_54 4 5 0.00000000000659993
Solanum tuberosum ST4.03ch10 2 CH_stu_77 4 4 0.00000000000201876
Theobroma cacao Chromosome_2 2 CH_tca_116 3 3 0.00000000804614
Vaccinium macrocarpon chr3_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_357 2 4 0.000557491
Vigna mungo CM024076.1 2 CH_vmu_218 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001