Functional clusters

Information

  • Type MapMan
  • Description Solute transport.channels.MIP family.small basic intrinsic protein (SIP)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr12 1 CH_acertr_566 2 2 0.00070497
Daucus carota DCARv2_Chr6 1 CH_dca_483 2 2 0.000956663
Fragaria vesca Fvb6 1 CH_fve_410 2 2 0.000353461
Marchantia polymorpha scaffold_59 1 CH_mpo_108 2 2 0.000331327
Nelumbo nucifera chr7 1 CH_nnu_22 5 6 9.75907e-16
Olea europaea chr4 1 CH_oeu_319 2 2 0.000320273
Pisum sativum chr3LG5 1 CH_psa_380 2 2 0.000521635
Rosa chinensis RcHm_v2.0_Chr2 1 CH_rch_791 2 3 0.000717541
Sequoiadendron giganteum chr2 1 CH_sgi_1279 2 3 0.000438418
Acer truncatum chr12 2 CH_acertr_566 2 2 0.00070497
Daucus carota DCARv2_Chr6 2 CH_dca_483 2 2 0.000956663
Fragaria vesca Fvb6 2 CH_fve_410 2 2 0.000353461
Marchantia polymorpha scaffold_59 2 CH_mpo_108 2 2 0.000331327
Nelumbo nucifera chr7 2 CH_nnu_22 5 6 9.75907e-16
Olea europaea chr4 2 CH_oeu_319 2 2 0.000320273
Pisum sativum chr3LG5 2 CH_psa_380 2 2 0.000521635
Rosa chinensis RcHm_v2.0_Chr2 2 CH_rch_791 2 3 0.000717541
Sequoiadendron giganteum chr2 2 CH_sgi_1279 2 3 0.000438418

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001