Functional clusters
Information
- Type MapMan
- Description Solute transport.channels.MIP family.tonoplast intrinsic protein (TIP)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00109 | 1 | CH_atr_334 | 2 | 2 | 0.000794407 |
| Camellia sinensis var. sinensis | Chr8 | 1 | CH_camsi_114 | 5 | 7 | 0.000000000023417 |
| Camellia sinensis var. sinensis | Chr10 | 1 | CH_camsi_423 | 3 | 3 | 0.00000558583 |
| Capsicum annuum | PGAv.1.6.scaffold298 | 1 | CH_can_84 | 4 | 4 | 0.00000000230894 |
| Chara braunii | BFEA01000017 | 1 | CH_cbr_12 | 4 | 7 | 0.000000000585976 |
| Corchorus olitorius | AWUE01023851.1 | 1 | CH_col_87 | 2 | 2 | 0.000292099 |
| Helianthus annuus | HanXRQChr13 | 1 | CH_han_336 | 4 | 18 | 0.00000385905 |
| Lactuca sativa | Lsat_1_v8_lg_6 | 1 | CH_lsa_69 | 5 | 6 | 0.00000000000269093 |
| Marchantia polymorpha | scaffold_135 | 1 | CH_mpo_15 | 4 | 4 | 0.000000000141471 |
| Sequoiadendron giganteum | chr10 | 1 | CH_sgi_329 | 4 | 4 | 0.000000000347199 |
| Sequoiadendron giganteum | chr2 | 1 | CH_sgi_358 | 4 | 5 | 0.00000000173562 |
| Sequoiadendron giganteum | chr7 | 1 | CH_sgi_678 | 3 | 5 | 0.000012952 |
| Selaginella moellendorffii | scaffold_1 | 1 | CH_smo_125 | 2 | 2 | 0.000280112 |
| Amborella trichopoda | AmTr_v1.0_scaffold00109 | 2 | CH_atr_334 | 2 | 2 | 0.000794407 |
| Camellia sinensis var. sinensis | Chr8 | 2 | CH_camsi_114 | 5 | 7 | 0.000000000023417 |
| Camellia sinensis var. sinensis | Chr10 | 2 | CH_camsi_423 | 3 | 3 | 0.00000558583 |
| Capsicum annuum | PGAv.1.6.scaffold298 | 2 | CH_can_84 | 4 | 4 | 0.00000000230894 |
| Chara braunii | BFEA01000017 | 2 | CH_cbr_12 | 4 | 7 | 0.000000000585976 |
| Corchorus olitorius | AWUE01023851.1 | 2 | CH_col_87 | 2 | 2 | 0.000292099 |
| Helianthus annuus | HanXRQChr13 | 2 | CH_han_336 | 4 | 18 | 0.00000385905 |
| Lactuca sativa | Lsat_1_v8_lg_6 | 2 | CH_lsa_69 | 5 | 6 | 0.00000000000269093 |
| Marchantia polymorpha | scaffold_135 | 2 | CH_mpo_15 | 4 | 4 | 0.000000000141471 |
| Sequoiadendron giganteum | chr10 | 2 | CH_sgi_329 | 4 | 4 | 0.000000000347199 |
| Sequoiadendron giganteum | chr2 | 2 | CH_sgi_358 | 4 | 5 | 0.00000000173562 |
| Sequoiadendron giganteum | chr7 | 2 | CH_sgi_678 | 3 | 5 | 0.000012952 |
| Selaginella moellendorffii | scaffold_1 | 2 | CH_smo_125 | 2 | 2 | 0.000280112 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |