Functional clusters
Information
- Type MapMan
- Description Solute transport.channels.MIP family.plasma membrane intrinsic protein (PIP)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr12 | 1 | CH_acertr_157 | 4 | 19 | 0.000000512018 |
| Capsicum annuum | PGAv.1.6.scaffold888 | 1 | CH_can_176 | 3 | 3 | 0.00000122846 |
| Citrus clementina | scaffold_6 | 1 | CH_ccl_191 | 3 | 3 | 0.00000121129 |
| Citrullus lanatus | CG_Chr04 | 1 | CH_cla_90 | 3 | 4 | 0.0000214758 |
| Cucumis melo | chr05 | 1 | CH_cme_39 | 5 | 7 | 0.00000000000624279 |
| Cucumis sativus L. | chr5 | 1 | CH_csa_145 | 3 | 3 | 0.0000029895 |
| Cucumis sativus L. | chr6 | 1 | CH_csa_42 | 5 | 6 | 0.00000000000281194 |
| Fragaria x ananassa | Fvb6-2 | 1 | CH_fan_376 | 3 | 6 | 0.0000865857 |
| Gossypium hirsutum | A10 | 1 | CH_ghi_421 | 3 | 3 | 0.000019704 |
| Gossypium hirsutum | D10 | 1 | CH_ghi_422 | 3 | 3 | 0.000019704 |
| Gossypium raimondii | Chr11 | 1 | CH_gra_211 | 3 | 3 | 0.0000112093 |
| Helianthus annuus | HanXRQChr07 | 1 | CH_han_131 | 6 | 19 | 0.0000000000703166 |
| Helianthus annuus | HanXRQChr14 | 1 | CH_han_378 | 3 | 3 | 0.0000134039 |
| Helianthus annuus | HanXRQChr13 | 1 | CH_han_551 | 4 | 29 | 0.000188401 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 1 | CH_lsa_270 | 3 | 3 | 0.00000610324 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 1 | CH_lsa_354 | 3 | 5 | 0.0000609846 |
| Marchantia polymorpha | scaffold_44 | 1 | CH_mpo_17 | 4 | 4 | 0.000000000848827 |
| Olea europaea | chr19 | 1 | CH_oeu_83 | 3 | 3 | 0.000000512889 |
| Oryza sativa ssp. japonica | chr07 | 1 | CH_osa_157 | 3 | 6 | 0.00000501892 |
| Petunia axillaris | Peaxi162Scf00413 | 1 | CH_pax_55 | 4 | 4 | 0.00000000506242 |
| Quercus lobata | 8 | 1 | CH_qlo_155 | 5 | 5 | 0.0000000000001067 |
| Salvia bowleyana | GWHASIU00000003 | 1 | CH_sbo_315 | 4 | 53 | 0.000111718 |
| Sechium edule | LG14 | 1 | CH_sed_62 | 4 | 5 | 0.000000012959 |
| Sequoiadendron giganteum | chr8 | 1 | CH_sgi_310 | 5 | 8 | 0.00000000010043 |
| Sequoiadendron giganteum | chr2 | 1 | CH_sgi_425 | 4 | 4 | 0.00000000368565 |
| Sequoiadendron giganteum | chr6 | 1 | CH_sgi_698 | 3 | 4 | 0.0000288087 |
| Solanum tuberosum | ST4.03ch09 | 1 | CH_stu_293 | 3 | 4 | 0.00000716754 |
| Acer truncatum | chr12 | 2 | CH_acertr_157 | 4 | 19 | 0.000000512018 |
| Capsicum annuum | PGAv.1.6.scaffold888 | 2 | CH_can_176 | 3 | 3 | 0.00000122846 |
| Citrus clementina | scaffold_6 | 2 | CH_ccl_191 | 3 | 3 | 0.00000121129 |
| Citrullus lanatus | CG_Chr04 | 2 | CH_cla_90 | 3 | 4 | 0.0000214758 |
| Cucumis melo | chr05 | 2 | CH_cme_39 | 5 | 7 | 0.00000000000624279 |
| Cucumis sativus L. | chr5 | 2 | CH_csa_145 | 3 | 3 | 0.0000029895 |
| Cucumis sativus L. | chr6 | 2 | CH_csa_42 | 5 | 6 | 0.00000000000281194 |
| Fragaria x ananassa | Fvb6-2 | 2 | CH_fan_376 | 3 | 6 | 0.0000865857 |
| Gossypium hirsutum | A10 | 2 | CH_ghi_421 | 3 | 3 | 0.000019704 |
| Gossypium hirsutum | D10 | 2 | CH_ghi_422 | 3 | 3 | 0.000019704 |
| Gossypium raimondii | Chr11 | 2 | CH_gra_211 | 3 | 3 | 0.0000112093 |
| Helianthus annuus | HanXRQChr07 | 2 | CH_han_131 | 6 | 19 | 0.0000000000703166 |
| Helianthus annuus | HanXRQChr14 | 2 | CH_han_378 | 3 | 3 | 0.0000134039 |
| Helianthus annuus | HanXRQChr13 | 2 | CH_han_551 | 4 | 29 | 0.000188401 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 2 | CH_lsa_270 | 3 | 3 | 0.00000610324 |
| Lactuca sativa | Lsat_1_v8_lg_2 | 2 | CH_lsa_354 | 3 | 5 | 0.0000609846 |
| Marchantia polymorpha | scaffold_44 | 2 | CH_mpo_17 | 4 | 4 | 0.000000000848827 |
| Olea europaea | chr19 | 2 | CH_oeu_83 | 3 | 3 | 0.000000512889 |
| Oryza sativa ssp. japonica | chr07 | 2 | CH_osa_157 | 3 | 6 | 0.00000501892 |
| Petunia axillaris | Peaxi162Scf00413 | 2 | CH_pax_55 | 4 | 4 | 0.00000000506242 |
| Quercus lobata | 8 | 2 | CH_qlo_155 | 5 | 5 | 0.0000000000001067 |
| Salvia bowleyana | GWHASIU00000003 | 2 | CH_sbo_315 | 4 | 53 | 0.000111718 |
| Sechium edule | LG14 | 2 | CH_sed_62 | 4 | 5 | 0.000000012959 |
| Sequoiadendron giganteum | chr8 | 2 | CH_sgi_310 | 5 | 8 | 0.00000000010043 |
| Sequoiadendron giganteum | chr2 | 2 | CH_sgi_425 | 4 | 4 | 0.00000000368565 |
| Sequoiadendron giganteum | chr6 | 2 | CH_sgi_698 | 3 | 4 | 0.0000288087 |
| Solanum tuberosum | ST4.03ch09 | 2 | CH_stu_293 | 3 | 4 | 0.00000716754 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |