Functional clusters

Information

  • Type MapMan
  • Description Solute transport.carrier-mediated transport.CPA superfamily.CPA-1 family.proton:lithium/sodium cation antiporter (SOS1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 1 CH_arhy_661 2 4 0.000538863
Coffea canephora chr11 1 CH_ccan_344 2 20 0.000651591
Cardamine hirsuta Chr1 1 CH_chi_300 2 2 0.000207361
Fragaria vesca Fvb4 1 CH_fve_268 2 2 0.0000589102
Magnolia biondii Chr13 1 CH_mbi_418 2 3 0.000145695
Trochodendron aralioides group0 1 CH_tar_263 2 2 0.0000600366
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 2 CH_arhy_661 2 4 0.000538863
Coffea canephora chr11 2 CH_ccan_344 2 20 0.000651591
Cardamine hirsuta Chr1 2 CH_chi_300 2 2 0.000207361
Fragaria vesca Fvb4 2 CH_fve_268 2 2 0.0000589102
Lotus japonicus chr4 2 CH_lja_266 2 2 0.0000715077
Magnolia biondii Chr13 2 CH_mbi_418 2 3 0.000145695
Trochodendron aralioides group0 2 CH_tar_263 2 2 0.0000600366

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001